BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D09SP1|AL427159
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1337 924 0.0
3x_Contig1025 611 e-175
>3x_Contig1337
Length = 7771
Score = 924 bits (464), Expect = 0.0
Identities = 474/480 (98%)
Strand = Plus / Plus
Query: 2 caccttgagcgatggtcacgttacccaacaatttgttcaattcgtcatcgtttctgatag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 caccttgagcgatggtcacgttacccaacaatttgttcaattcgtcatcgtttctgatag 1331
Query: 62 ccaattgcaaatgtcttgggatgattctggtcttcttgttgtctctagcagcgttaccgg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 ccaattgcaaatgtcttgggatgattctggtcttcttgttgtctctagcagcgttaccgg 1391
Query: 122 ccaatwccaagatttcagcggccaaatattccaaaacggcagtmaaatagactggagcac 181
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1392 ccaattccaagatttcagcggccaaatattccaaaacggcagtcaaatagactggagcac 1451
Query: 182 cagaaccgattctttgagcgtagttaccctttctcaacaatctgtgaactctaccgactg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 cagaaccgattctttgagcgtagttaccctttctcaacaatctgtgaactctaccgactg 1511
Query: 242 ggaaagtcaaacctgcctaagcagatctagattgagaagccttagcagcagaaccagctt 301
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 ggaaagtcaaacctgccttagcagatctagattgagaagccttagcagcagaaccagctt 1571
Query: 302 taccacctttacctgacattttttatatkgtattatagtgtttgatttgtgtgtggtttt 361
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1572 taccacctttacctgacattttttatattgtattatagtgtttgatttgtgtgttgtttt 1631
Query: 362 tgatttagtagtatctgtgatgatgaacaacaaacaatacgaagagctaaactaggaaca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1632 tgatttagtagtatctgtgatgatgaacaacaaacaatacgaagagctaaactaggaaca 1691
Query: 422 gaagaggaactgaaagtgcaagaagtgacctctttatataagavacggtggcacggtagt 481
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1692 gaagaggaactgaaagtgcaagaagtgacctctttatataagaaacggtggcacggtagt 1751
Score = 542 bits (272), Expect = e-154
Identities = 334/352 (94%), Gaps = 7/352 (1%)
Strand = Plus / Plus
Query: 493 cactgagcaaagcacacgctcacacaacaaaagtaaaaaaagaaaaagcggcagcaaaaa 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1762 cactgagcaaagcacacgctcacacaacaaaagtaaaaaaagaaaaagcggcagcgaaaa 1821
Query: 553 caaaccccctgttctcacagcttcacctgtgccgtgaaactcctggaatgtgaatatatt 612
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1822 caaaccccctgttctcacagcttcacctgtgccgtgaaactcctggaatgttaatatatt 1881
Query: 613 gtctcttgagatgtcgaggaaccattttttcaaacaatcaacggattcccttttactatg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1882 gtctcttgagatgtcgaggaaccattttttcaaacaatcaacggattcccttttactatg 1941
Query: 673 gactcccgtggttgtgtccgaaaaaggaaactttttcgtagaccgtgctaccggttacgc 732
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1942 gactcccgtggttgtttccgaaaaaggaaactttttcgtagaccgtgctaccggttacgc 2001
Query: 733 gcggagaatatctccatccgccatagtaaaccggttta-cacagcgam---gtcnantng 788
|||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 2002 gcggagaatatctccatccgccatagtaaaccggtttaccacagcgaagctgtggtcatg 2061
Query: 789 acatgcctttttagcgtgaaaa--caaaaaaacaagta-caaagacacaatt 837
|||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 2062 acatgcctttttagcgtgaaaaacaaaaaaaacaagtaccaaagacacaatt 2113
>3x_Contig1025
Length = 2581
Score = 611 bits (307), Expect = e-175
Identities = 318/323 (98%)
Strand = Plus / Minus
Query: 2 caccttgagcgatggtcacgttacccaacaatttgttcaattcgtcatcgtttctgatag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2192 caccttgagcgatggtcacgttacccaacaatttgttcaattcgtcatcgtttctgatag 2133
Query: 62 ccaattgcaaatgtcttgggatgattctggtcttcttgttgtctctagcagcgttaccgg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2132 ccaattgcaaatgtcttgggatgattctggtcttcttgttgtctctagcagcgttaccgg 2073
Query: 122 ccaatwccaagatttcagcggccaaatattccaaaacggcagtmaaatagactggagcac 181
||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2072 ccaattccaagatttcagcagccaaatattccaaaacggcagtcaaatagactggagcac 2013
Query: 182 cagaaccgattctttgagcgtagttaccctttctcaacaatctgtgaactctaccgactg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2012 cagaaccgattctttgagcgtagttaccctttctcaacaatctgtgaactctaccgactg 1953
Query: 242 ggaaagtcaaacctgcctaagcagatctagattgagaagccttagcagcagaaccagctt 301
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1952 ggaaagtcaaacctgcctttgcagatctagattgagaagccttagcagcagaaccagctt 1893
Query: 302 taccacctttacctgacattttt 324
|||||||||||||||||||||||
Sbjct: 1892 taccacctttacctgacattttt 1870
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6792
Number of Sequences: 1807
Number of extensions: 6792
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 2
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)